PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe0919s0001.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 234aa    MW: 26046.6 Da    PI: 9.9428
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe0919s0001.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.32.3e-072968244
                        HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHH CS
                 HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiL 44
                        r+ h+ +Er RR+ +++ f  L +llP+a   +  + + ++i 
  Aqcoe0919s0001.1.p 29 RERHKLAERERRKTMRELFLSLHSLLPHA---NMVRKEQSSIQ 68
                        789*************************7...44444444443 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.36E-81991IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.0932778IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.9E-62964IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.15E-42975No hitNo description
PfamPF000101.2E-42967IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.9E-6218227IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MTVEWNNDCE TVSSKEKSPG SSGAPINVRE RHKLAERERR KTMRELFLSL HSLLPHANMV  60
RKEQSSIQDQ IIKYLPLAAA QLGSLQKRKD SISLNRSNNN TTLSPKIQVS DKNSSDSLNS  120
SDCDIKVAPE PSLSVAIRVR GDRVNVSFID NKGTSQALLL SAILDELQAH NLELVSSTHC  180
RDGSKVVHHT ECKISDALER SPALLKKGLQ ELAYRLHKLR KSSTLKRTFD QLD*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010246746.19e-99PREDICTED: uncharacterized protein LOC104589957
TrEMBLE3WDH21e-114E3WDH2_COPJA; BHLH transcriptional factor